article · Bioinformatics Advances

BonoboFlow: viral genome assembly and haplotype reconstruction from nanopore reads

Christian Ndekezi
Pontiano Kaleebu
Jyoti Sutar
Denis K. Byarugaba
Magambo Phillip Kimuda
Denis Byamukama
Susan Mugaba
Jayanta Bhattacharya
F Kato
Nicholas Bbosa
Anne Kapaata
Obondo James Sande
Denis Omara
Angella Nakyanzi
Alfred Ssekagiri
Fortunate Natwijuka
Sheila N. Balinda

20241 citationOpen accessMakerere University

Abstract

BonoboFlow and corresponding containerized images are publicly available at https://github.com/nchis09/BonoboFlow and https://hub.docker.com/r/nchis09/bonobo_image. The test dataset is available at SRA repository Accession number: PRJNA1137155, http://www.ncbi.nlm.nih.gov/bioproject/1137155.

Research topics

Bacteriophages and microbial interactions
Genomics and Phylogenetic Studies
Advanced biosensing and bioanalysis techniques

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DOI: 10.1093/bioadv/vbaf115

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